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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00002.1_g00106.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 365aa MW: 41179.7 Da PI: 9.3774 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00002.1_g00106.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 36.3 | 1.2e-11 | 267 | 311 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
++ +r ++NRe+A+rsR+RKk e L+e+v++L+ +N++L ++l
Rsa1.0_00002.1_g00106.1 267 RKRKRTISNRESAKRSRLRKKRLFEDLTEEVDQLKLKNQELVNQL 311
567999*********************************998665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0004523 | Molecular Function | RNA-DNA hybrid ribonuclease activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MFSTSLEPRL RQEQXWSIWL SRNALIFEAL TSPPEEIATR AIRLGREWTY AQGIKATPTN 60 VIQRGTNSKS HPVETEGETL CRSDAAWNKQ TKQAGFGWIF TGHGFTTAVE GSNSQDYVDS 120 PLVAEAMAMR LALIKAATLE IKTLRMSSDN RTLIRAIHGD MQAKEIRGIV HDILEISSVF 180 VSISFSFVSR DFNKEADASA KLSLRRRSVS TLNGSYVHKK KKEPVHICFD DATITGDEIT 240 EILAFLQSDT SDNPSGSNEL LAPVDERKRK RTISNRESAK RSRLRKKRLF EDLTEEVDQL 300 KLKNQELVNQ LANVLSCGNA ISQENNRLKT ESVCLEIRLL ELYRFLVAMQ SPISTRLNYI 360 AKLLI
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 268 | 287 | RKRTISNRESAKRSRLRKKR |