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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00001.1_g00011.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 341aa MW: 37295 Da PI: 10.2234 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00001.1_g00011.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95.6 | 3.5e-30 | 272 | 330 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +d ++++tYeg+H h
Rsa1.0_00001.1_g00011.1 272 ADEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDAMMLIVTYEGDHSHA 330
69*************************988****************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MAVELMMNRN YGGLRVKGEE GVFSANMEEE EDTALREAAS AGIHGVKEFL KLIGQKSQPT 60 EITAVTDVAV NSFKKVISLL GRSRTGHARF RRGPATTKTE ESGGDWKTEE KPATTTTTVL 120 LNRQNTEQNG GSAFRVYCPT PIHRRPPLSH NNNSPTIKNG SSSSANGRSP QEPSTINFTP 180 SPPVSAANSF MSSHHRCDTE SNQMSSGFEF TNPSSQVSGS IGKPPLSSSV SLKRKCNSSP 240 SGRCHCTKKR KSRVKRVIRV PAVSSKMADI PADEYSWRKY GQKPIKGSPH PRGYYKCSSV 300 RGCPARKHVE RALDDAMMLI VTYEGDHSHA LVLESHHDKA L
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 232 | 250 | KRKCNSSPSGRCHCTKKRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM593132 | 0.0 | KM593132.1 Brassica oleracea var. capitata WRKY transcription factor (WRKY7) mRNA, complete cds. |