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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
RrC9906_p1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
NAC |
| Protein Properties |
Length: 165aa MW: 19302.2 Da PI: 4.0223 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC9906_p1 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 37.5 | 6.9e-12 | 9 | 106 | 36 | 128 |
NAM 36 ev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfy..........kgrapkgektdW 121
e+ di++ +P+dLp + +e++wyf++++ ++ t +n +++Wk+ g+++ vl+ ++lvg+k++++f ++ ++ + +W
RrC9906_p1 9 EChDIFSRHPRDLPG--YPRETHWYFYCRKLDSQVT---PNS---HSFWKQIGEETGVLDPknYDTLVGIKRIFTFVdheeepndilLSDEDEPPQYNW 99
4569**********4..34789******99886543...444...589***********98555567**********766655554436777888**** PP
NAM 122 vmheyrl 128
+m+e++l
RrC9906_p1 100 FMDEFSL 106
*****97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 165 aa
Download sequence Send
to blast |
MGSPIVPEEC HDIFSRHPRD LPGYPRETHW YFYCRKLDSQ VTPNSHSFWK QIGEETGVLD 60
PKNYDTLVGI KRIFTFVDHE EEPNDILLSD EDEPPQYNWF MDEFSLPLTI SETDWVLCHV 120
FHKNIEPESE EEEGENEEKE TVEAESLDLL IEKDENVLPP SPSPP
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC232543 | 1e-170 | AC232543.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH006F04, complete sequence. |
