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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
RrC9803_p2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
NAC |
Protein Properties |
Length: 313aa MW: 36192.5 Da PI: 7.3542 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
RrC9803_p2 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 32.9 | 1.9e-10 | 5 | 118 | 11 | 128 |
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvf 108
de ++ +yLk+ + + ++++k++d+++ +P++ + +++ f + + +++a g+ + g W+ +dk ++++ +gel g kk+L f
RrC9803_p2 5 DELILLRYLKPMIVDGASWPQHFLKDADVFNKNPRKVF-----NPEDTVFVIVNPRTEACGNTDGC--DYGSWRIMARDKLIKNEeTGELLGFKKILKF 96
5556789****988877555588**************5.....34566777777777777655554..689***********99878899********* PP
NAM 109 y..kgrapkgektdWvmheyrl 128
k ++ + k +Wvm+eyrl
RrC9803_p2 97 CvkKTTRAREYKRSWVMEEYRL 118
9653444555799*******98 PP
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2 | NAM | 21.7 | 5.7e-07 | 170 | 296 | 9 | 128 |
NAM 9 PtdeelvveyLkkkvegkkleleevikevdiykvePwdL..pk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104
P++ee +yL++ + +++ e + d+y ++P+ L p+ e+ + F++r++++ + ++g W+ d+++ s ge+ g ++
RrC9803_p2 170 PNQEEDGAYYLRNLIGHEN-EW-PSYVTNDVYCMHPSALvdPRqDQMFAESGLCIFANRKEASGYTDG----CDRGCWRIMVGDEPIPSIMGETFGYRR 262
6677777899999888877.33.235677**********43322222356688999988776543322....3569*********************** PP
NAM 105 tLvfy........kgrapkge..ktdWvmheyrl 128
++ f ++p+ge +W+m+eyrl
RrC9803_p2 263 VFKFCgeddkakhFYTDPNGEvvLLNWIMEEYRL 296
****976665543124455543378*******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MGAGDELILL RYLKPMIVDG ASWPQHFLKD ADVFNKNPRK VFNPEDTVFV IVNPRTEACG 60 NTDGCDYGSW RIMARDKLIK NEETGELLGF KKILKFCVKK TTRAREYKRS WVMEEYRLPS 120 KWNPKQDHVI CKIRLLFQTE IGFLLSKHFS YSSAPLPATQ SLPDYGYGLP NQEEDGAYYL 180 RNLIGHENEW PSYVTNDVYC MHPSALVDPR QDQMFAESGL CIFANRKEAS GYTDGCDRGC 240 WRIMVGDEPI PSIMGETFGY RRVFKFCGED DKAKHFYTDP NGEVVLLNWI MEEYRLAGEV 300 MKNKVLCVIK LRR
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