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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
RrC9409_p1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
Dof |
Protein Properties |
Length: 286aa MW: 30615.8 Da PI: 8.9984 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
RrC9409_p1 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 124.8 | 2.8e-39 | 46 | 105 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++ +kcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk s
RrC9409_p1 46 DHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPS 105
6789*****************************************************976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MLDSTTTSPS AADILAACST QPQASAVAVA AAAMMDGGRR LRPPHDHPQK CPRCESTHTK 60 FCYYNNYSLS QPRYFCKTCR RYWTKGGTLR NIPVGGGCRK NKKPSSSNTS SSKKPSSDLM 120 ALAHSHQNYQ NASLGFSHFG GNGMMGSYTA PNHSNVGFLE SKYGGLFSQS PRPIDFLDGK 180 FDLMGVNNNL VMVDHGSNGD HQHNHHMGLS HGLGLNNNNN NDNQRVTSVM DVKPSPKLLS 240 LDWQQEQGYS EGSGNGGGGR SDGSGYGGGG GYINSLGSSW NSLMNG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB009053 | 1e-129 | AB009053.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQB2. |
GenBank | AK228992 | 1e-129 | AK228992.1 Arabidopsis thaliana mRNA for Dof zinc finger protein - like, complete cds, clone: RAFL16-29-O12. |
GenBank | BT020467 | 1e-129 | BT020467.1 Arabidopsis thaliana At5g62940 gene, complete cds. |
GenBank | BT020576 | 1e-129 | BT020576.1 Arabidopsis thaliana At5g62940 gene, complete cds. |
GenBank | CP002688 | 1e-129 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |