PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RrC7299_p1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 312aa    MW: 35500.5 Da    PI: 9.4965
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RrC7299_p1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.43e-081652052262
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  22 qRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                 +RKka++ eLe++vk Le+ N++L ++l++l++e   lk+ 
  RrC7299_p1 165 ERKKAYLGELENRVKDLENRNSELEERLSTLQNENLMLKQI 205
                 6**********************************999986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077161.2E-4165198IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.5E-6165204No hitNo description
CDDcd147044.68E-10165199No hitNo description
Gene3DG3DSA:1.20.5.1707.4E-10165199No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MQALYRPAAR DPQALLLIWR SKKSAPRKIR KLQSVLKVCL SGLSLKYDEI TRIEGIKRPE  60
LLSAGSSSTA NERKLADVCA LNANEVTKLL RVFGAPSDAR IYWARGEPLR KKQHSKPSVM  120
VMAFHESDEE IRRVPEFGGE ATGKEISGRE SGGTGFEEQS FSTAERKKAY LGELENRVKD  180
LENRNSELEE RLSTLQNENL MLKQISNGSW NTFIDCDLCA WLVRVMNSEV PTPYCGYFVI  240
CEKIYSRTWN VTDGEVNEST IVHLLNSRSF FGKIKGSCTV AKFAEKPKRL LNSFDRQDYK  300
RSHFLNDLRH QG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.11e-20bZIP family protein