 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
RrC679_p1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
NF-YC |
| Protein Properties |
Length: 129aa MW: 14577 Da PI: 10.6968 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC679_p1 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 53.7 | 4.8e-17 | 8 | 89 | 17 | 97 |
NF-YC 17 knhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
+ e+P++r+kki+kad+d+++i +ea l++ + elf+ l+ +s + a e+kr+t++ + +av+r + + dfl+d p
RrC679_p1 8 IRPEFPITRVKKIMKADKDINKINSEALHLVTYSAELFLRFLAEKSSVVAAEKKRKTVNLDHLRTAVKRHQpTRDFLLDSLP 89
5678***************************************************************9976489*****987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 129 aa
Download sequence Send
to blast |
MAEEEETIRP EFPITRVKKI MKADKDINKI NSEALHLVTY SAELFLRFLA EKSSVVAAEK 60
KRKTVNLDHL RTAVKRHQPT RDFLLDSLPL PSAQPVRVGK TVSEKKPPPV GTRRIDAFFS 120
KGKAKVDSP
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KC797140 | 1e-176 | KC797140.1 Brassica napus transcription factor subunit NF-YC13 (NF-YC13) gene, complete cds. |
