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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
RrC6461_p2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
E2F/DP |
| Protein Properties |
Length: 352aa MW: 39962.7 Da PI: 9.1293 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC6461_p2 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 70.6 | 1.9e-22 | 11 | 76 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
rkeksL++l ++fl+l+++ + + + l+++a +L v +rRRiYD++N+Le+++l++++ kn+++wkg
RrC6461_p2 11 RKEKSLGVLVSNFLRLYNRDDVDLIGLDDAAGKL---GV--ERRRIYDVVNILESIGLVARRGKNQYSWKG 76
79*****************999************...**..****************************98 PP
|
| 2 | E2F_TDP | 77.2 | 1.6e-24 | 136 | 216 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71
+keksL++l+q+f+kl+ +s+++ +tl+ ++k+L++ ++++k+RR+YDi+NV++++nliek ++k+++rw g
RrC6461_p2 136 KKEKSLWVLAQNFVKLFLCSDDDLITLDGATKALLNVsqdpmNMRTKVRRLYDIANVFSSMNLIEKthipeTKKPAYRWLG 216
69********************************887999******************************99*******87 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0008284 | Biological Process | positive regulation of cell proliferation |
| GO:0009733 | Biological Process | response to auxin |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MESLGRQSYS RKEKSLGVLV SNFLRLYNRD DVDLIGLDDA AGKLGVERRR IYDVVNILES 60
IGLVARRGKN QYSWKGFGQV PTVLSLLKEE GMREKFGIIP CVTNSEMVLY DQVREEPLKL 120
SPDDQENSPS PKLDCKKEKS LWVLAQNFVK LFLCSDDDLI TLDGATKALL NVSQDPMNMR 180
TKVRRLYDIA NVFSSMNLIE KTHIPETKKP AYRWLGPKAI SEARFLAAPL CDRIEPKKRV 240
FGTEITNFTT TKRAKTDCSK DQKQYESQNN TCSVIKQEQC DYKSAVKSLV GPLSPAGTSK 300
KTNPGKSNNQ SIDVLETLSS THKLQYCNHE LIGLLGHYTD TWRSWHEEFG RK
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Inhibitor of E2F-dependent regulation of gene expression. Binds specifically the E2 recognition site as a monomer without interacting with DP proteins. May be up-regulating E2FA and down-regulating repressors of cell cycle progression. Promotes cell proliferation and represses cell elongation. Regulated by proteolysis via a ubiquitin-proteasome pathway. {ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11867638, ECO:0000269|PubMed:19937368}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated posttranscroptionally by auxin. {ECO:0000269|PubMed:19937368}. |
