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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
RrC5917_p1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
NAC |
| Protein Properties |
Length: 269aa MW: 30947 Da PI: 4.5927 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC5917_p1 | genome | MSU | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 62.8 | 1e-19 | 26 | 178 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkk......leleevikevdiykvePwdLpkkvka...eekewyfFskrdkkya....tgkrknra....tksgyWka 85
G+ F+P+d+el++ +L +k+e+ + e+e++i+ ++y+ ePw L++ +++ +++ew++F++r++ + +g++++r + g Wk
RrC5917_p1 26 GIYFNPEDQELIKLHLLPKLETYRkpkskdEECEDFIEMKNVYDKEPWLLDH-TNHplfRKNEWFYFVTRSQVSVknigRGRNSKRRvngdNDGGSWKP 123
99*****************998876666655556689999**********84.222345889*****999988773344344444432333559****9 PP
NAM 86 tgkdkevlsk.kgelvglkktLvfy...kgrapkge............ktdWvmheyrl 128
k k + ++ +ge++g k+tL f k +k + +++W+mhey+l
RrC5917_p1 124 NAK-KYIEDEeTGETIGKKQTLKFTksdK---KKQKrgdgtsvvvpgsNSSWIMHEYSL 178
988.56665559999**********5542...322222344555555599*******97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MSNNYEDGGV YYDPDENMFN NDEDGGIYFN PEDQELIKLH LLPKLETYRK PKSKDEECED 60
FIEMKNVYDK EPWLLDHTNH PLFRKNEWFY FVTRSQVSVK NIGRGRNSKR RVNGDNDGGS 120
WKPNAKKYIE DEETGETIGK KQTLKFTKSD KKKQKRGDGT SVVVPGSNSS WIMHEYSLPD 180
ENTFQELVLC KIRKISNSKD EDDHHNVVED GSIGDLSDKL ASTGLDDRQQ TLIYAAPPAT 240
PGDRSLPIDV DKSDDDDEVM NQELDTHLF
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