|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
RrC569_p1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
Family |
WRKY |
Protein Properties |
Length: 322aa MW: 36674 Da PI: 7.594 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
RrC569_p1 | genome | MSU | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 104.2 | 6.9e-33 | 181 | 238 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp+vv++tYe++Hnh+
RrC569_p1 181 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSYQDPTVVITTYESQHNHP 238
8********************************************************7 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0050832 | Biological Process | defense response to fungus |
GO:0051607 | Biological Process | defense response to virus |
GO:0070301 | Biological Process | cellular response to hydrogen peroxide |
GO:1901002 | Biological Process | positive regulation of response to salt stress |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MSNETKDLNN YQYTSSYNHY NDISNQNILN LPYVSGPSSY NANMISSQIG YDLQSSPQGV 60 YESGFELSPS STEFFSSSFD QENGFYNAFN YNTCNKSQEV VGSGGAIIES KTRGSASPSS 120 SEADHHRGED SGKSLRKREA DDGAKDDQRA QKEVKTKRKE EKKQREPRVS FVTKTEVEHL 180 EDGYRWRKYG QKAVKNSPYP RSYYRCTTQK CNVKKRVERS YQDPTVVITT YESQHNHPIP 240 TSRRSAMFAG PASSNCNSTS LSSVSDFIIN TPRSFSRDDL FRAPYASISV NPNYEQQQNQ 300 ELQHDYELLK DMVPSVFFKH EP
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-TTGAC[CT]-3'), a frequently occurring stress-responsive cis-acting element. Functions as positive regulator of salt stress response. Binds the W box of LTI78/RD29A stress-response gene and directly regulates its transcription under salt stress. Functions antagonistically with VQ9 to regulate sodium and potassium homeostasis under salt stress by regulating the expression of downstream SOS (SALT OVERLY SENSITIVE) stress-responsive genes. The DNA-binding activity of WRKY8 is decreased by VQ9 (PubMed:23451802). Functions as negative regulator of basal resistance to the bacterial pathogen P. syringae and as positive regulator of resistance to the fungal pathogen to B. cinerea (PubMed:20367464). Functions as positive regulator of defense response againt tobamovirus (TMV) by regulating both the abscisic acid and ethylene signaling pathways. Positively regulates ABI4 expression and negatively modulates ACS6 and ERF104 expression by directly binding to the W box consensus motifs within their promoters (PubMed:23650359). {ECO:0000269|PubMed:20367464, ECO:0000269|PubMed:23451802, ECO:0000269|PubMed:23650359}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By wounding, abscisic acid (ABA), salicylic acid (SA), H(2)O(2), and infection with P.syringae pv. tomato DC3000 and B.cinerea (PubMed:20367464). Induced by salt stress (PubMed:23451802). {ECO:0000269|PubMed:20367464, ECO:0000269|PubMed:23451802}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KC246569 | 0.0 | KC246569.1 Brassica napus WRKY transcription factor 8.1 (WRKY8.1) mRNA, complete cds. |