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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
RrC5114_p2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
NAC |
Protein Properties |
Length: 258aa MW: 30813.1 Da PI: 9.0734 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
RrC5114_p2 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 46.4 | 1.2e-14 | 104 | 230 | 9 | 128 |
NAM 9 PtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104
Ptd e+v++yLk v++++ ++++++ ++y v Pw + + + ++ ++ +yfF++r +k+ +r + g W+ +d+ ++sk++++ g k+
RrC5114_p2 104 PTD-EIVSYYLKMCVDKRNDWPSHFLESEQVYGVAPWMIVdAdqSSAELQEGTYFFVNRTEKSG--RRD--GCDVGCWRIMRRDRVIISKRNKVLGFKR 197
555.89**********99966657899************63332222234577*****999863..333..34679*********************** PP
NAM 105 tLvfykgrapkge.........ktdWvmheyrl 128
++ f +++ +++ k +Wvm+ey l
RrC5114_p2 198 VFKFCVKEKAEPVykfwgdekcKVTWVMDEYML 230
*****4433333333444444499*******87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MARDKLIKTE ETGTILGFKK ILKFCEKDKK RSEQEEEERV WVMEEYKLVD KWKHDQVICK 60 IRLLLQHEVS SLLAKHLSFL PKWIIPFSRE NFMPRRDLCA PNIPTDEIVS YYLKMCVDKR 120 NDWPSHFLES EQVYGVAPWM IVDADQSSAE LQEGTYFFVN RTEKSGRRDG CDVGCWRIMR 180 RDRVIISKRN KVLGFKRVFK FCVKEKAEPV YKFWGDEKCK VTWVMDEYML AKKKEQGKVI 240 CRISLLFPLP LELHVRDF
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