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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
RrC4553_p1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
ERF |
| Protein Properties |
Length: 249aa MW: 27849.3 Da PI: 5.1174 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC4553_p1 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 64.5 | 2.1e-20 | 109 | 159 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr ++ +g+++AeIrdp + + +r++lg+f+ta eAa+a+++a+ kl+g
RrC4553_p1 109 HYRGVRMRP-WGKFAAEIRDP---NrRGTRIWLGTFDTAIEAARAYDQAAFKLRG 159
69*******.**********9...4334*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000302 | Biological Process | response to reactive oxygen species |
| GO:0001944 | Biological Process | vasculature development |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009644 | Biological Process | response to high light intensity |
| GO:0010200 | Biological Process | response to chitin |
| GO:0051301 | Biological Process | cell division |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MATPSEASAL SFIKKHLLDE SSPLPNTKPE ITDSLEFEPE AKPEIPLASN QSFTFRPNPR 60
GVSGSASRSN RKPALKIEPP NRTEWIQFAT GDPEPEQLPV HVADEEKGHY RGVRMRPWGK 120
FAAEIRDPNR RGTRIWLGTF DTAIEAARAY DQAAFKLRGS KAIVNFPLEV GTWSTRAEVK 180
RKRDGEEEEE EEVKVVAKVV KTEESHAVET ETSSLTAVDD WDLTEFMSMP LLSPLSPHPP 240
FGYPQLSVV
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:9756931}. |
