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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
RrC3862_p2 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
LBD |
| Protein Properties |
Length: 201aa MW: 22608.7 Da PI: 6.6503 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC3862_p2 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 120.3 | 1e-37 | 4 | 103 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
+CaaCk+lrrkC++ Cv+apyfp ++++++ ++hk+FGas+v k+l++l++++r+da++slvyeA+ + dPv+G+ i +lq+ql+ l+ +++ +++
RrC3862_p2 4 PCAACKYLRRKCTQACVFAPYFPPNKQEDYTAIHKVFGASQVAKILNDLHPSQRQDAVTSLVYEAQTLLLDPVHGCSLQICNLQRQLKDLQDQVQIARN 102
7********************************************************************************************999887 PP
DUF260 100 e 100
RrC3862_p2 103 D 103
5 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MTTPCAACKY LRRKCTQACV FAPYFPPNKQ EDYTAIHKVF GASQVAKILN DLHPSQRQDA 60
VTSLVYEAQT LLLDPVHGCS LQICNLQRQL KDLQDQVQIA RNDLAPYNNI VPSLDLQDQV 120
QIARNDLAPY NNIVPPLDLP PPITYQQNIH NPMLMPVVSN YGGQLTSQQL NEEAHRVESE 180
KSAQVKQMQQ NAAQSKRDDC P
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