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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
RrC370_p4 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
M-type_MADS |
Protein Properties |
Length: 362aa MW: 41463.6 Da PI: 9.2238 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
RrC370_p4 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 66.7 | 2.4e-21 | 35 | 80 | 6 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 6 ksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+s + +++++R+++++ KA ELS+LC++ev+vi+++s+g+l+++++
RrC370_p4 35 SSLKATSLANRQETVFRKARELSILCGVEVCVIYYGSDGELRTWPK 80
78899***************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MASSSFFPSS SSSPVTTKKT TKVSQLRATL FQKASSLKAT SLANRQETVF RKARELSILC 60 GVEVCVIYYG SDGELRTWPK DREKVKDMAL RYSRLSDVKR HTKQHDLDTF LEEIDDPKNK 120 KKVKLDSGYK YPDWDPRFDN FSAEQLTELM QSLERKRTVM QHRLGAVLES QRQRSMRYMN 180 VANQEQMQMN HLQLQQQIPS QAQSLAPLPN SLTLYQYPNM DMLLGAQDTG TSEFLSTSML 240 PYNGFNTNYV NMFPNQFNQN CSKVEDYSVF PQGTGINSMK VEDYTGPVWA QGSGTNGLQN 300 MDMYRYNNNN NSNTNGFSSH QLVQFPAQRA AAPVYQCMDG STQDNCRLRS KCQQCDRPRV 360 HR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |