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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
RrC3218_p2 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
MYB |
| Protein Properties |
Length: 331aa MW: 36903.2 Da PI: 8.9344 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC3218_p2 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 43 | 1e-13 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd +l +++++G+g +W + + + g++R++k+c++rw++yl
RrC3218_p2 14 RGPWSPEEDSKLRGYIEKYGNGgNWISFPLKAGLRRCGKSCRLRWLNYL 62
89*********************************************97 PP
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| 2 | Myb_DNA-binding | 41 | 4.4e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +++eEd ++ +++ G++ W+ Ia++++ gRt++++k++w++
RrC3218_p2 69 GDFSEEEDMIIFSLFAAIGSR-WSIIAAHLP-GRTDNDIKNYWNT 111
789******************.*********.***********97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MGRAPCCDKT KVKRGPWSPE EDSKLRGYIE KYGNGGNWIS FPLKAGLRRC GKSCRLRWLN 60
YLRPNIKHGD FSEEEDMIIF SLFAAIGSRW SIIAAHLPGR TDNDIKNYWN TKLRKKLMSS 120
SSSSSSHSSS AMAPPFLNPN SQVVKRPSTT ISPSSYNPYF ENPTKALISN NDCFEADNHQ 180
IFPFVKPNYP QGLSLPESNN NNISATSGFS LNHNMCDYYS NHNSFSSDAS GNRSEIMMKQ 240
EEIMMLMMID NHIDQRTKGY NGDFTQGYYS NYINGHGNLK QMISGTGTNS NINMGGSGSE 300
SASSTSSISN LAENKSSGSL LQHKCLPYFY S
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator of genes involved in the regulation of meristematic competence, such as CUC2. Positively regulates axillary meristems (AMs) formation and development, especially at early phases of vegetative growth, probably by specifying a stem cell niche for AM formation. Modulates the negative regulation mediated by gibberellic acid on the timing of developmental phase transitions. {ECO:0000269|PubMed:16461581, ECO:0000269|PubMed:16473968}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By a shift from short days to long days, in the axils of primordia on the elongating stem. {ECO:0000269|PubMed:16461581}. |
| Publications
? help Back to Top |
- Schnaubelt D,Schulz P,Hannah MA,Yocgo RE,Foyer CH
A phenomics approach to the analysis of the influence of glutathione on leaf area and abiotic stress tolerance in Arabidopsis thaliana.
Front Plant Sci, 2013. 4: p. 416
[PMID:24204368] - Guo D, et al.
The WRKY Transcription Factor WRKY71/EXB1 Controls Shoot Branching by Transcriptionally Regulating RAX Genes in Arabidopsis.
Plant Cell, 2015. 27(11): p. 3112-27
[PMID:26578700] - Yu YT, et al.
Overexpression of the MYB37 transcription factor enhances abscisic acid sensitivity, and improves both drought tolerance and seed productivity in Arabidopsis thaliana.
Plant Mol. Biol., 2016. 90(3): p. 267-79
[PMID:26646286]
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