PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RrC2761_p3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family | bZIP | ||||||||
Protein Properties | Length: 291aa MW: 32000.5 Da PI: 5.3961 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 53.9 | 4e-17 | 132 | 180 | 3 | 51 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 ++kr rr+++NR++ArrsRqRK+++++ Le v++L++ N++L k+l RrC2761_p3 132 DVKRIRRMYSNRISARRSRQRKQEQLADLESQVDSLKGVNSTLYKQLID 180 68*****************************************988755 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.3E-13 | 125 | 185 | No hit | No description |
SMART | SM00338 | 1.7E-14 | 130 | 194 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.358 | 132 | 178 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.74E-12 | 133 | 183 | No hit | No description |
Pfam | PF00170 | 4.5E-14 | 133 | 178 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 9.40E-18 | 135 | 186 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 137 | 152 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence Send to blast |
MDGHNTGKDI GMKRSASELA LQELLTKFLS RQESILDTSP LDPSFDLMNW DYTCELRDSR 60 LKSESLNPVG LFLDAQSSIC ENLSADSPVS ANKPEAKRAA RGTVSVYTDD HSDEEDAETE 120 AGQSEMTNDP NDVKRIRRMY SNRISARRSR QRKQEQLADL ESQVDSLKGV NSTLYKQLID 180 ATQQFRTAGT NNRVLKSDVE TLRVKVKLAE DLIARGSLTS SLNQLLQTHL SPPPPHSINS 240 LHYTGNNTSP AITVHSDHSL FPGITISGQN SSPGLGNVSS EAVSCVSDIW P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 152 | RRSRQRK |
2 | 146 | 153 | RRSRQRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018439024.1 | 0.0 | PREDICTED: LOW QUALITY PROTEIN: basic leucine zipper 9-like | ||||
Swissprot | Q9FUD3 | 1e-159 | BZIP9_ARATH; Basic leucine zipper 9 | ||||
TrEMBL | A0A3P6B9K8 | 0.0 | A0A3P6B9K8_BRACM; Uncharacterized protein | ||||
STRING | Bra020471.1-P | 0.0 | (Brassica rapa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6370 | 26 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 1e-149 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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