 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
RrC25612_p1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
MYB_related |
| Protein Properties |
Length: 143aa MW: 16477.9 Da PI: 10.7957 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC25612_p1 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 55.6 | 1.2e-17 | 55 | 97 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g+ T+eE+ l+++++++lG++ W++Ia++++ gRt++++k++w++
RrC25612_p1 55 GNITAEEQHLIIQLHAKLGNR-WSKIAKHLP-GRTDNEIKNFWRT 97
677******************.*********.***********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 143 aa
Download sequence Send
to blast |
MKKTGRGKEI TSQKEEGRVR MGSWTMEEDL ILFNYMVKVF GIPSPKPLWP DVRQGNITAE 60
EQHLIIQLHA KLGNRWSKIA KHLPGRTDNE IKNFWRTKIQ RHIKLSSSTE TKNIRDCTGN 120
SQRSEMTTTD QGSSSKASIW PRV
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor acting redundantly with MYB21 and MYB24 to control stamen filament elongation in the late developed flowers. Repressed at the transcript levels by DELLA proteins. {ECO:0000269|PubMed:19325888}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK118091 | 3e-63 | AK118091.1 Arabidopsis thaliana At3g01530 mRNA for putative transcription factor, complete cds, clone: RAFL19-34-G03. |
| GenBank | AY088761 | 3e-63 | AY088761.1 Arabidopsis thaliana clone 94595 mRNA, complete sequence. |
| GenBank | AY519582 | 3e-63 | AY519582.1 Arabidopsis thaliana MYB transcription factor (At3g01530) mRNA, complete cds. |
| GenBank | BT005574 | 3e-63 | BT005574.1 Arabidopsis thaliana clone U50886 putative myb family transcription factor (At3g01530) mRNA, complete cds. |
