 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
RrC25395_p1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
ERF |
| Protein Properties |
Length: 164aa MW: 17760 Da PI: 8.6183 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC25395_p1 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 52.6 | 1.1e-16 | 91 | 141 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ykGVr ++ +g+W AeI+dps + r +lg f tae+Aa+a+++a+ ++ g
RrC25395_p1 91 KKYKGVRKKP-SGKWSAEIWDPSL---KIRRWLGMFPTAEMAARAYDEAAAEFIG 141
59*****999.7*********943...4899*******************99876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 164 aa
Download sequence Send
to blast |
MDYSDNVPSD AQNPIAPRPP ALYLTRDQEH QIMVSALRQV ISNVGSDTSS SNGITGGALP 60
PPDAGPCPLC GITGCYGCAF QQRDNETKKE KKYKGVRKKP SGKWSAEIWD PSLKIRRWLG 120
MFPTAEMAAR AYDEAAAEFI GRISARRGQM NGRGVKELSG GGDD
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
