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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
RrC24581_p1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
Dof |
Protein Properties |
Length: 178aa MW: 19781.4 Da PI: 9.7298 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
RrC24581_p1 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 121.9 | 2.3e-38 | 62 | 120 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
++k+++cprC+s++tkfCy+nny+++qPr+fC++C+ryWt+GGalrnvPvG+grrk k
RrC24581_p1 62 PDKIIACPRCKSMETKFCYFNNYNVKQPRHFCRGCQRYWTAGGALRNVPVGAGRRKAKP 120
68999***************************************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 178 aa
Download sequence Send
to blast |
MATQDSQGIK LFGKTITFNA SNITTTTIKK EVQQQQQQPE LQTTTSVRSS SSSSDLTVEK 60 RPDKIIACPR CKSMETKFCY FNNYNVKQPR HFCRGCQRYW TAGGALRNVP VGAGRRKAKP 120 PGRVGGFAEF LGAATGAVDQ VELDALLAEE WRAAASYDGF RHDFPVKRLR CYTDGQSC
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Acts as a negative regulator in the phytochrome-mediated light responses. Controls phyB-mediated end-of-day response and the phyA-mediated anthocyanin accumulation. Not involved in direct flowering time regulation. {ECO:0000269|PubMed:19619493}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By red or far-red light. Circadian-regulation. The transcript level rises progressively from dawn and decreases during the night. {ECO:0000269|PubMed:19619493}. |