 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
RrC23667_p1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
MYB_related |
| Protein Properties |
Length: 214aa MW: 24534.8 Da PI: 4.3237 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC23667_p1 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 29.9 | 1.3e-09 | 3 | 25 | 22 | 46 |
T-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46
+ W++Ia++++ gRt++++k++w++
RrC23667_p1 3 R-WSKIAQYLP-GRTDNEIKNYWRT 25
4.*********.***********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MNRWSKIAQY LPGRTDNEIK NYWRTRVQKH AKQLKCDVNS QQFKDTMKYI WMPRLVERIQ 60
SASVSTTTSS CITTSNNQSM TYDHNSMGQQ LGVVNSNDYI TPENSSLTVS PVSDLTEYHS 120
APKPNPEYYS GQVGDSYYPD QNLVGPEMLP GNYFDYSGLL GEDLTATHES NLDWFENIDG 180
VGSSSSDSLW NIGEKDEDFW FLQQQEQFNN NDNF
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor contributing to the regulation of stamen maturation and male fertility in response to jasmonate signaling. Required for correct timing of anther dehiscence. Acts as a negative regulator of abscisic acid-induced cell death. Not involved in the regulation of BOI. Regulated by MYB21 and at a lower level by MYB24. Negatively regulated by the proteasome in an SCF(COI1) E3 ubiquitin-protein ligase complex-dependent manner. {ECO:0000269|PubMed:14555693, ECO:0000269|PubMed:19091873, ECO:0000269|PubMed:20921156, ECO:0000269|PubMed:23952703}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by jasmonate and pathogen infection. {ECO:0000269|PubMed:14555693, ECO:0000269|PubMed:19091873}. |
