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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
RrC23289_p2 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
NAC |
| Protein Properties |
Length: 187aa MW: 21483.4 Da PI: 5.1101 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC23289_p2 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 32.3 | 3e-10 | 18 | 131 | 11 | 128 |
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLv 107
de ++ +yLk+ v++ +++ +++d+++ +P++ + +++ f + + +++a gk + g W+ +dk ++++ +g+l g kk+L
RrC23289_p2 18 DELILLRYLKPMVDDGASWPQHFSEDADVFNKNPSNTF-----NPEDTVFVIVNPRTEACGKTDGC--DYGSWRIMARDKLIKNEeTGNLLGFKKILK 108
5556789******99996665778999********985.....34566777777777777655544..689***********99878889******** PP
NAM 108 fy..kgrapkgektdWvmheyrl 128
f k ++ + k +Wvm+eyrl
RrC23289_p2 109 FCvkKTTSAREYKRSWVMEEYRL 131
*965445566679********98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 187 aa
Download sequence Send
to blast |
MAADDYLQIR EELMGAGDEL ILLRYLKPMV DDGASWPQHF SEDADVFNKN PSNTFNPEDT 60
VFVIVNPRTE ACGKTDGCDY GSWRIMARDK LIKNEETGNL LGFKKILKFC VKKTTSAREY 120
KRSWVMEEYR LPSKWNPNQD HVICKVRLLF QTEIGFLLSK HFSYSSGPLP DTQSLPAYGY 180
GLPQEEE
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