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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
RrC222_p7 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
G2-like |
| Protein Properties |
Length: 160aa MW: 17934.8 Da PI: 9.8638 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC222_p7 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 63.1 | 5.4e-20 | 29 | 65 | 1 | 37 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmk 37
kprl+Wtp+LHerF+eav+qLGG++kAtPkti+++ +
RrC222_p7 29 KPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVSH 65
79*******************************9865 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 160 aa
Download sequence Send
to blast |
MHLASERHPF LRGGNSPGDS GLILSTDAKP RLKWTPDLHE RFIEAVNQLG GADKATPKTI 60
MKVSHQHLIH TYICLVHLFF FGFTRVVNFM KFGYQKYRLS KNLNGQANSG LNKIGMMTMM 120
EEKSPSDADE IQSESLSIGP QPNKYAILNV LSYIASKLLV
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | ATAC011698 | 1e-59 | AC011698.6 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence, complete sequence. |
| GenBank | CP002686 | 1e-59 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |
