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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
RrC2068_p2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
VOZ |
| Protein Properties |
Length: 463aa MW: 51624.8 Da PI: 5.6793 |
| Description |
VOZ family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC2068_p2 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | VOZ | 422.4 | 7.3e-130 | 188 | 405 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99
p+ saflg kcalwdc+rpaqg +w++dycssfha+la+neg+pg++pv+rp+gi+lkdgllfaalsak+ gk+vgipecegaatakspwna+elfdl+
RrC2068_p2 188 PQLSAFLGQKCALWDCPRPAQGLDWFKDYCSSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVGIPECEGAATAKSPWNAPELFDLT 286
6779*********************************************************************************************** PP
VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelkl.vdekksak 197
+leget+rewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m efgglkrsyymdpqp+++fewhlyeyei+++da+alyrlelk+ vd+kk++k
RrC2068_p2 287 VLEGETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQIMSEFGGLKRSYYMDPQPLHHFEWHLYEYEISKCDACALYRLELKVvVDGKKNSK 385
*****************************************************************************************7369****** PP
VOZ 198 gkvskdsladlqkklgrlta 217
g+vs +s+adlqk++ rlta
RrC2068_p2 386 GRVSIESVADLQKQMRRLTA 405
******************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009408 | Biological Process | response to heat |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009631 | Biological Process | cold acclimation |
| GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 463 aa
Download sequence Send
to blast |
MTGKRSKTTC RSASHKLFKD KAKNRVDDLQ GMLLDLQYAR KESSATDVIL LEEQVNLMLC 60
EWKSELNDPS PASSSQQGQG GTLWSFSSDI CRLLQLCDEE DDATSKLAAP KPEPTDQNLE 120
PYVPLADHCK DPSSVVGNNF DGTGHSDYSH YDLQQEFEPN YNGGFNDCPG YGVEGALDIS 180
AFIPSICPQL SAFLGQKCAL WDCPRPAQGL DWFKDYCSSF HAALAFNEGP PGMNPVVRPG 240
GIGLKDGLLF AALSAKAGGK DVGIPECEGA ATAKSPWNAP ELFDLTVLEG ETLREWLFFD 300
KPRRAFESGN RKQRSLPDYN GRGWHESRKQ IMSEFGGLKR SYYMDPQPLH HFEWHLYEYE 360
ISKCDACALY RLELKVVVDG KKNSKGRVSI ESVADLQKQM RRLTAEFPHE NNNNNKRCNK 420
GKPKVNTKVA TRNVQNTVEQ GNDYGVGEEF NYLVGNPTGY YIA
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB125256 | 0.0 | AB125256.1 Arabidopsis thaliana AtVOZ1 mRNA for transcription factor AtVOZ1, complete cds. |
| GenBank | AK227014 | 0.0 | AK227014.1 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL09-45-I22. |
| GenBank | BT020261 | 0.0 | BT020261.1 Arabidopsis thaliana At1g28520 gene, complete cds. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Yasui Y,Kohchi T
VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
[PMID:25351333] - Kumar S,Choudhary P,Gupta M,Nath U
VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
Plant Physiol., 2018. 176(4): p. 2917-2930
[PMID:29507119] - Song C,Lee J,Kim T,Hong JC,Lim CO
VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
Planta, 2018. 247(6): p. 1439-1448
[PMID:29536220]
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