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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
RrC2041_p2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
G2-like |
| Protein Properties |
Length: 343aa MW: 38925.1 Da PI: 7.3635 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC2041_p2 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 99.5 | 2.3e-31 | 206 | 260 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
+r+rW++eLH++Fv+a+++LGG+++AtPk+i+e+m v+gLt+++vkSHLQkYR++
RrC2041_p2 206 QRRRWSQELHRKFVDALHSLGGPQVATPKQIREMMRVDGLTNDEVKSHLQKYRMH 260
8****************************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MVQTDTDKMG LNLNLSMYSL AKPLSQFLDQ VSRIKDHDSK LSEIDDYVGK LEEERRKIDV 60
FKRELPLCML LLNEAIERLK EEASSVMMMA SNGKLDVGEG VILESDNNKK NWMSSAQLWI 120
SNPNSQLQST NEEEDGCVTQ KPIQTCNNQG GAFPPPYNPP PPPPPAPLSL RTPTSEILMD 180
YRRIEQNHPQ FSKPIIQSHH VPKKDQRRRW SQELHRKFVD ALHSLGGPQV ATPKQIREMM 240
RVDGLTNDEV KSHLQKYRMH IRKHPLHPAK TLPSSDQAVL LDRETQSLIS LTRSDSPQSP 300
LVVDRGCLFS NNGHSSEDEV KSDGRSSWKS VSNKNRPALD LEL
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 6e-14 | 207 | 258 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 6e-14 | 207 | 258 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 6e-14 | 207 | 258 | 3 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 6e-14 | 207 | 258 | 3 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 6e-14 | 207 | 258 | 3 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 6e-14 | 207 | 258 | 3 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 6e-14 | 207 | 258 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 6e-14 | 207 | 258 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 6e-14 | 207 | 258 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 6e-14 | 207 | 258 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 6e-14 | 207 | 258 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 6e-14 | 207 | 258 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5'-GTAGATTCCT-3' of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5'-AAGAATCTTT-3' found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions. |
