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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
RrC1743_p4 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
SRS |
Protein Properties |
Length: 149aa MW: 16577.8 Da PI: 10.8781 |
Description |
SRS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
RrC1743_p4 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF702 | 88.5 | 1.6e-27 | 67 | 136 | 4 | 77 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkre 77
++ C dCGn+akk+C +eRCRtCCksrg++CathvkstWvp++ + +++ss+++++ + ++s+++++
RrC1743_p4 67 EEKVCTDCGNRAKKECLFERCRTCCKSRGYNCATHVKSTWVPSSAASRS----SSSSSDRNKKLKLHSSDKPKS 136
6789**************************************9876543....233333334444444555554 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 149 aa
Download sequence Send
to blast |
MATAASTFTI INSFLRRRRR LHHYMLGLRN TIFLPQPPSQ VTQPSPSPVN FAAVEESNKS 60 SRNSNVEEKV CTDCGNRAKK ECLFERCRTC CKSRGYNCAT HVKSTWVPSS AASRSSSSSS 120 DRNKKLKLHS SDKPKSVLIV PTTTSRQGN
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM) (By similarity). {ECO:0000250}. |