 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
RrC1641_p1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
MYB_related |
| Protein Properties |
Length: 278aa MW: 31236 Da PI: 7.8158 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC1641_p1 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 47.3 | 4.9e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd +l +++++G+g +W + + + g++R++k+c++rw++yl
RrC1641_p1 14 RGPWSPEEDSKLRGYIEKYGNGgNWISLPLKAGLRRCGKSCRLRWLNYL 62
89*********************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MGRAPCCDKT KVKRGPWSPE EDSKLRGYIE KYGNGGNWIS LPLKAGLRRC GKSCRLRWLN 60
YLRPNIKHGD FSEEEDRIIL SLFAAIGSRF PNLSLKTTIT LSSYTPYVEN PTRSLINING 120
FEADDQQIFP FINPNYPHDF SLADMCSNND NNIFGTSGFL LNHNICDHFS NHNSLSSEVN 180
GKRSEIIMKQ EEMMMIDHHI GQMTKGYNGD FTQGYYNNYI NGHGDLKQMI SGSGTNSNIN 240
MGGSGSRSAS SSSFISDLAE NKTSSSFLQH KCLPYFYS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator of genes involved in the regulation of meristematic competence, such as CUC2. Positively regulates axillary meristems (AMs) formation and development, especially at early phases of vegetative growth, probably by specifying a stem cell niche for AM formation. Modulates the negative regulation mediated by gibberellic acid on the timing of developmental phase transitions. {ECO:0000269|PubMed:16461581, ECO:0000269|PubMed:16473968}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By a shift from short days to long days, in the axils of primordia on the elongating stem. {ECO:0000269|PubMed:16461581}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK175507 | 2e-90 | AK175507.1 Arabidopsis thaliana mRNA for myb like transcription factor (MYB37), complete cds, clone: RAFL21-93-G12. |
| GenBank | AY519628 | 2e-90 | AY519628.1 Arabidopsis thaliana MYB transcription factor (At5g23000) mRNA, complete cds. |
| GenBank | DQ446976 | 2e-90 | DQ446976.1 Arabidopsis thaliana clone pENTR221-At5g23000 myb family transcription factor (At5g23000) mRNA, complete cds. |
| Publications
? help Back to Top |
- Schnaubelt D,Schulz P,Hannah MA,Yocgo RE,Foyer CH
A phenomics approach to the analysis of the influence of glutathione on leaf area and abiotic stress tolerance in Arabidopsis thaliana.
Front Plant Sci, 2013. 4: p. 416
[PMID:24204368] - Guo D, et al.
The WRKY Transcription Factor WRKY71/EXB1 Controls Shoot Branching by Transcriptionally Regulating RAX Genes in Arabidopsis.
Plant Cell, 2015. 27(11): p. 3112-27
[PMID:26578700] - Yu YT, et al.
Overexpression of the MYB37 transcription factor enhances abscisic acid sensitivity, and improves both drought tolerance and seed productivity in Arabidopsis thaliana.
Plant Mol. Biol., 2016. 90(3): p. 267-79
[PMID:26646286]
|
