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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
RrC1301_p5 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
NAC |
Protein Properties |
Length: 376aa MW: 43186.4 Da PI: 6.4192 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
RrC1301_p5 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 113.5 | 2.3e-35 | 5 | 124 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96
+GfrF Ptdee+v++yL+ k g + +++++i++vdi+++ePw+Lp k k +++++ wy+F ++++ +g+r+nr+tksg+Wk+tg ++++++k +
RrC1301_p5 5 VGFRFIPTDEEIVDYYLRLKNLGGDtSHVDKAISTVDICSFEPWELPsKsKRESRDQMWYYFGRKEN---RGERQNRKTKSGFWKKTGVTTNIMRKrgN 100
7*****************99877773666677***************433445577799*9998766...689**********************9877 PP
NAM 97 gelvglkktLvfykgrapkgektdWvmheyr 127
+e++g k++Lvf +k++Wvmhey
RrC1301_p5 101 REKIGEKRVLVFQ-------SKSEWVMHEYV 124
888*********8.......5899******7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MENRVGFRFI PTDEEIVDYY LRLKNLGGDT SHVDKAISTV DICSFEPWEL PSKSKRESRD 60 QMWYYFGRKE NRGERQNRKT KSGFWKKTGV TTNIMRKRGN REKIGEKRVL VFQSKSEWVM 120 HEYVATFLPP TQTTYTVCKV IFKGDPRDLP SSAPGGGAVI EKLTTTSFNP RHFTGLLDAE 180 EETQIDDALR RAFDNVSTHD LNSLLNNENS DEEEEHRNLL FMQEDRNDYR PKMSLTGFIS 240 DDDSDSDLIS ATTTTTTTTT FPPHNANVLF TMIVFHPNLE PFSNRRIDQI TDLQNAPNST 300 TKLMSPTQVV SKTLETSLDT SEKKKNLYED VQGTEMGESE MDQYIINNKR AGFYYRKIQS 360 CIKKTLLCSS IPPRTG
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-18 | 6 | 123 | 20 | 140 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-18 | 6 | 123 | 20 | 140 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-18 | 6 | 123 | 20 | 140 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-18 | 6 | 123 | 20 | 140 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-18 | 6 | 123 | 23 | 143 | NAC domain-containing protein 19 |
3swm_B | 1e-18 | 6 | 123 | 23 | 143 | NAC domain-containing protein 19 |
3swm_C | 1e-18 | 6 | 123 | 23 | 143 | NAC domain-containing protein 19 |
3swm_D | 1e-18 | 6 | 123 | 23 | 143 | NAC domain-containing protein 19 |
3swp_A | 1e-18 | 6 | 123 | 23 | 143 | NAC domain-containing protein 19 |
3swp_B | 1e-18 | 6 | 123 | 23 | 143 | NAC domain-containing protein 19 |
3swp_C | 1e-18 | 6 | 123 | 23 | 143 | NAC domain-containing protein 19 |
3swp_D | 1e-18 | 6 | 123 | 23 | 143 | NAC domain-containing protein 19 |
4dul_A | 1e-18 | 6 | 123 | 20 | 140 | NAC domain-containing protein 19 |
4dul_B | 1e-18 | 6 | 123 | 20 | 140 | NAC domain-containing protein 19 |
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