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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
RrC1301_p4 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
NAC |
| Protein Properties |
Length: 267aa MW: 30473 Da PI: 6.8797 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC1301_p4 | genome | MSU | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 87.4 | 2.6e-27 | 5 | 136 | 6 | 127 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103
F+P ++el+++yL++k+++++ + + i+ev+i+++eP dLp +k e++ wyf s+ +k + +r++ra k+g Wk tg++ ++++++g+l+glk
RrC1301_p4 5 TFNPPEDELINYYLNNKITENDDPQGKQINEVNICHHEPADLPGLAKIESShTWYFISPVEK-FGKLNRRKRASKTGHWKITGNSCTIKDTDGNLIGLK 102
7*********************999889***************6444444426777777665.56789999**************************** PP
NAM 104 ktLvfy..........kgrapkgektdWvmheyr 127
k Lvf ++ + +k +W++he++
RrC1301_p4 103 KFLVFQenknsrsstlLSTTTQQHKFTWIIHEFH 136
******444333332214444455999******8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 267 aa
Download sequence Send
to blast |
MNRYTFNPPE DELINYYLNN KITENDDPQG KQINEVNICH HEPADLPGLA KIESSHTWYF 60
ISPVEKFGKL NRRKRASKTG HWKITGNSCT IKDTDGNLIG LKKFLVFQEN KNSRSSTLLS 120
TTTQQHKFTW IIHEFHSFLR HPNKDAFVLC KLKKKTRSRR GVAVDASPAV IDLSPTIIAD 180
PILNHPQMLT HNKDPVEDYG GDYCNDLEEL IPEIDSCRWL DHSYQFGNNH WGSFADTTHS 240
WEQGESSGFP CGENGHVYGQ DTVGNSK
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