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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
RrC1114_p2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
G2-like |
| Protein Properties |
Length: 255aa MW: 29018.7 Da PI: 8.1224 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC1114_p2 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 98.4 | 5.1e-31 | 123 | 177 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
+r+rW+++LH+rF++a++++GGs++AtPk+i+++m+v+gLt+++vkSHLQkYR++
RrC1114_p2 123 QRRRWSEDLHRRFIDALQRIGGSQVATPKQIRDVMNVDGLTNDEVKSHLQKYRMH 177
8****************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MLLLNEAIER LKEEASSSSV MMASKLETDN KKNWMSSAQL WISNTTNSQL PSTNEEEEDR 60
CVSQPPFQTC NKPNQGGAFL SFNRSLPPPP PAPVPLSLMT PTLEILTDYN RTEQSHHIQK 120
KEQRRRWSED LHRRFIDALQ RIGGSQVATP KQIRDVMNVD GLTNDEVKSH LQKYRMHIRK 180
HPLHVAKTLS ASDQRGLLIS LSRSDSPQGP LLVDRCLFSN SAGGHISEEE EKSDGRSSWK 240
SESRWKRQPL LDLEL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5'-GTAGATTCCT-3' of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5'-AAGAATCTTT-3' found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK316664 | 2e-71 | AK316664.1 Arabidopsis thaliana AT4G37180 mRNA, complete cds, clone: RAFL06-70-N17. |
| GenBank | ATU62741 | 2e-71 | U62741.1 Arabidopsis thaliana putative cytoskeletal protein mRNA, complete cds. |
| GenBank | AY039841 | 2e-71 | AY039841.1 Arabidopsis thaliana AT4g37180/C7A10_180 mRNA, partial cds. |
| GenBank | BT028985 | 2e-71 | BT028985.1 Arabidopsis thaliana At4g37180 mRNA, complete cds. |
