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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
RrC10831_p2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
FAR1 |
| Protein Properties |
Length: 198aa MW: 23168.2 Da PI: 7.462 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| RrC10831_p2 | genome | MSU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 86.8 | 3.3e-27 | 28 | 116 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
fY++Y++++GF +r+ + ++s+r+g+i r+f C+keg+ + + k+ + r++r++tr gCka+++vk +++gkw+vtk+++eHnH+l+
RrC10831_p2 28 FYDDYSRSLGFVMRVMSCRRSERDGRILARRFGCNKEGRCVSVRGKSGSVRKPRQSTREGCKAMIHVKYDRSGKWVVTKFVKEHNHPLV 116
9**************************************99999999****************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MAVEDDDSTI EEPREGTEFE SEEAAKTFYD DYSRSLGFVM RVMSCRRSER DGRILARRFG 60
CNKEGRCVSV RGKSGSVRKP RQSTREGCKA MIHVKYDRSG KWVVTKFVKE HNHPLVVEPR 120
QARQSLDEKD KRIHELTVEL RNEKRLCAAY KEQLDAFAKI VEEYSNRMSK KVESVVENLK 180
EFERIEVELL HSNEDDIF
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription activator involved in regulating light control of development. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
