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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
RrC1003_p2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
Dof |
Protein Properties |
Length: 370aa MW: 39657.8 Da PI: 8.0764 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
RrC1003_p2 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 124 | 5.1e-39 | 70 | 129 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++ +kcprC+s++tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk s
RrC1003_p2 70 DHPQKCPRCESAHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPS 129
6789*****************************************************976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 370 aa
Download sequence Send
to blast |
MGLTSLQVCM DSDWLQEAES SGGSMLDSTT TSPTAAEILA ACSTRPQASA MAVAAAALMD 60 GGRRLRPPHD HPQKCPRCES AHTKFCYYNN YSLSQPRYFC KTCRRYWTKG GTLRNIPVGG 120 GCRKNKKPSS SNSSSSTSSG KKPSNIVTTN TNDLMALAQS HQNYQNASLG FSHFGGNGMM 180 GSYTALGHSN VGFLESKYGG LLSPSPRPIE FLDSKLDLMG VNNDNPVMVD HGINGDHHHH 240 HHHHMGMNHG LGLNNNNHDG FQGISPANNG NGGGGLMDIS ISQRLMLANY EHHHYNHHED 300 NQRVTSIMDV KPSPKLLSLD WQQGQGYSDG SGNGGGGRSD GGSGYINGLG STWNGLMNGY 360 GSSTKTNSMV
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Promotes expression (PubMed:19915089). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Involved in the regulation of interfascicular cambium formation and vascular tissue development, particularly at a very early stage during inflorescence stem development; promotes both cambium activity and phloem specification, but prevents xylem specification (PubMed:19915089). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:19915089, ECO:0000269|PubMed:30626969}. |