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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pta012867 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
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| Family |
LBD |
| Protein Properties |
Length: 126aa MW: 13996 Da PI: 6.0776 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-157a-Pinus_taeda-27489 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 80.8 | 2.2e-25 | 3 | 93 | 9 | 99 |
DUF260 9 rrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
+++C ++ ++ f +++ +kfa++h++FGa nv+kl+++lp+++r da++s+vyeA ar++dP G++g+i++lq+q++ l+ +++++++
Pta012867 3 QKECLANSTMLYRFLSNDLHKFAILHQVFGACNVIKLIRDLPPDQRIDAINSMVYEASARLQDPALGCTGIIQQLQRQISALECQISTTQA 93
789*999999999************************************************************************998875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 126 aa
Download sequence Send
to blast |
MEQKECLANS TMLYRFLSND LHKFAILHQV FGACNVIKLI RDLPPDQRID AINSMVYEAS 60
ARLQDPALGC TGIIQQLQRQ ISALECQIST TQAIIQKIRS QQEQLLASIP GFGTAGEEDT 120
TSIGHH
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