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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pta001718 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
|
| Family |
G2-like |
| Protein Properties |
Length: 400aa MW: 44713.4 Da PI: 8.4866 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Pta#S24913503 | PU_unref | Unigene | View CDS |
| PUT-157a-Pinus_taeda-59604 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106.6 | 1.4e-33 | 48 | 102 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWtpeLHerFv+av+qLGG++kAtPk++l+ m+vkgLtl+h+kSHLQkYRl
Pta001718 48 KPRLRWTPELHERFVDAVSQLGGPDKATPKSVLREMGVKGLTLYHLKSHLQKYRL 102
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MEYPSNPGIV LNHGRAPSQP ERQHQQPVLT GSSHYPCDPS VVVSADPKPR LRWTPELHER 60
FVDAVSQLGG PDKATPKSVL REMGVKGLTL YHLKSHLQKY RLGKQPHREV SVDRSNDGGS 120
SDGGHCLSRM ARDSSIAPNH EAMQIADALR AQIEVQRRLH EQLEVQRRLQ LRIEAQGKYL 180
QTILEKAQQT LASEASTSAG LEATRAKLAD LASKLPTNSV KPNYSPVKVA PLMDIHRQDH 240
GDLEAKPHLR DRCSQNQFAG HTMEQRLNES ESPIEKKRCR KLFHERNGGN SPTKLRELCL 300
NASACKTEKE QEEEEEFIKP TTVERPAATR ALVDERMAML VQSNGLSLIQ ADHEPGLYHP 360
HSMLGNCRKV AEGLDLNRKG EGSVPQQGRE LDLNAYGWGR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-20 | 48 | 104 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-20 | 48 | 104 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 8e-21 | 48 | 104 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 8e-21 | 48 | 104 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 8e-21 | 48 | 104 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 8e-21 | 48 | 104 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-20 | 48 | 104 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-20 | 48 | 104 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-20 | 48 | 104 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-20 | 48 | 104 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-20 | 48 | 104 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-20 | 48 | 104 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 274 | 281 | EKKRCRKL |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:26586833}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
