 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Psi011967 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
C2H2 |
| Protein Properties |
Length: 331aa MW: 36550.9 Da PI: 7.8831 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Psi#S55421050 | PU_ref | Unigene | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 11.8 | 0.00074 | 267 | 289 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp Cg +Fs+ +L+ H + H
Psi011967 267 ECPRCGARFSSVASLVDHVESfH 289
5*****************98877 PP
|
| 2 | zf-C2H2 | 20.2 | 1.6e-06 | 303 | 325 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp+Cg+ Fs++ +L++H + H
Psi011967 303 VCPKCGRGFSNPVSLVQHVEKdH 325
7*****************99888 PP
|
| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| PROSITE profile | PS51039 | 6.983 | 40 | 92 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 0.0042 | 49 | 85 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 4.3E-10 | 52 | 84 | IPR000058 | Zinc finger, AN1-type |
| Gene3D | G3DSA:4.10.1110.10 | 7.8E-9 | 52 | 86 | IPR000058 | Zinc finger, AN1-type |
| SuperFamily | SSF118310 | 1.44E-9 | 53 | 84 | No hit | No description |
| Gene3D | G3DSA:4.10.1110.10 | 1.0E-10 | 123 | 179 | IPR000058 | Zinc finger, AN1-type |
| SuperFamily | SSF118310 | 3.92E-9 | 126 | 179 | No hit | No description |
| PROSITE profile | PS51039 | 8.253 | 131 | 178 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 5.1E-8 | 134 | 174 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 1.3 | 134 | 175 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS50157 | 9.099 | 266 | 294 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.55 | 266 | 289 | IPR015880 | Zinc finger, C2H2-like |
| SuperFamily | SSF57667 | 2.48E-6 | 267 | 321 | No hit | No description |
| PROSITE pattern | PS00028 | 0 | 268 | 289 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 9.681 | 302 | 330 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 3.3 | 302 | 325 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 304 | 325 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 331 aa
Download sequence Send
to blast |
XGSIPIPLSI FQGELVENNL RTLYIENLKS KFIWELQNSL IWENIAQSKT AGXVDFLPFD 60
CDRCKQVFCL EHRTYSQHHC PNANEHDVTV LVCPMCAKGV RLVPNEDPNI TWESHVSTDC 120
DPTNYDRVKK KPRCPAPGCK EILTFANKLK CRDCAQEICL KHRFGLDHKC PGPKKVEGNF 180
TFSGIFGKNP KEKAMANARA YSSPSSSTSQ SLRSGLFSAV SNLRASAEVG MTKLSSATND 240
VFNRVKSSAL STQQSQEGNM QPVLAEECPR CGARFSSVAS LVDHVESFHE SGHKGGFQEL 300
PDVCPKCGRG FSNPVSLVQH VEKDHGGTSI H
|
| Functional Description ? help
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| Source |
Description |
| UniProt | May be involved in environmental stress response. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cold, dehydration and salt stress. {ECO:0000269|PubMed:17033811}. |
