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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.I005300.1.p | ||||||||
Common Name | PRUPE_ppa027019mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 382aa MW: 42512.9 Da PI: 4.373 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 80.1 | 4.8e-25 | 10 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lp+Gf+F+P+d++l+ +yL +kv+g+++ e+vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r+ r++ sg+Wk Prupe.I005300.1.p 10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYENVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGSGTWKGEN 101 79*************************99999******99568*****742444222366799**************************887 PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++v + k+++ g+ k + + + ++ + W+mhey+l Prupe.I005300.1.p 102 SGTTVSDLenKENDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142 777776654477789999999887..566667999******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-30 | 7 | 164 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.445 | 10 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.4E-17 | 11 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence Send to blast |
MAPCESAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWHE 60 YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDLE NKENDLGIWK 120 RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE 180 TDTPVQSQNK RQRPQKVTSF EELIGDCTPM SEATGVGGSV SYLPTGLTQS QPDSSIAYPT 240 TVVSSQARAN NTDDVSQFHG GGDGDALMSD FLLSDTAQPF TEQALGSYAV CNQERASDVY 300 ETQQGLVLTD NNIGYWPSPF GSEEDQVNAL DFSMDYDLLD HLIDCDDDND GLRQSSTAQF 360 MGMGMENTTT ASSEANMVII D* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-14 | 4 | 142 | 9 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 166 | 172 | RGKRKLR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.I005300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT893413 | 0.0 | KT893413.1 Prunus persica cultivar Jinliuzaohong NAC68 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020409526.1 | 0.0 | NAC domain-containing protein 74 | ||||
TrEMBL | A0A1R3L506 | 0.0 | A0A1R3L506_PRUPE; Uncharacterized protein | ||||
STRING | EMJ14376 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 2e-18 | NAC domain containing protein 86 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.I005300.1.p |
Entrez Gene | 18779048 |