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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.8G264900.1.p |
Common Name | PRUPE_ppa008730mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
ERF |
Protein Properties |
Length: 322aa MW: 35682.6 Da PI: 5.5524 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.8G264900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61 | 2.8e-19 | 78 | 126 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r+++ +g+W+AeIrdp++ r++lg+f t+eeAa+a+++ ++k++g
Prupe.8G264900.1.p 78 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTPEEAARAYDREARKIRG 126
9*******.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MCGGAILSNL IPRNRGLRVT ASDIWPNSPF AKLNPDNFFD YNPSPLTRTD SSPRKRAQPT 60 SGNRQEEKPP KRARKNLYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTP EEAARAYDRE 120 ARKIRGKKAK VNFPNEDDDI PTQTYLRNPN PPSLFQTSSE NLSNSHMPKS FDLGFGYDLN 180 QIATISSNSN SKGLSSMNLV NTDPTVISGE ENSGSGSDGA YSSTAGLLGC NQNGSSCCYG 240 EAEVKELEET KEGILNKDAI AIMEENEVQK LSEELMAYEN MMKFYQIPYL DGQSTATQHP 300 PAQEGMVGDL WSFDDDRVSA P*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 2e-21 | 78 | 134 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 4e-21 | 73 | 136 | 10 | 74 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ825097 | 0.0 | HQ825097.1 Prunus persica cultivar Venture ethylene responsive factor (ERF2.b) mRNA, partial cds. |