 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.8G255800.1.p |
Common Name | PRUPE_ppa023775mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
Family |
C2H2 |
Protein Properties |
Length: 604aa MW: 65916 Da PI: 8.4498 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.8G255800.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 16.9 | 1.8e-05 | 96 | 118 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C+k F r nL+ H r H
Prupe.8G255800.1.p 96 FVCEICNKGFQRDQNLQLHRRGH 118
89*******************88 PP
|
2 | zf-C2H2 | 15.3 | 5.7e-05 | 172 | 194 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+kC +C+k + +s+ k H++t+
Prupe.8G255800.1.p 172 WKCDKCSKKYAVQSDWKAHQKTC 194
58*******************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 604 aa
Download sequence Send
to blast |
MSNITGDVEE GSFSSGNNTG ELEVHQENQQ QNHLQGSGSG GPSGAQSNSN GSVTQQQHQQ 60 QQQPPLKKKR NLPGTPDPSA EVIALSPTTL MATNRFVCEI CNKGFQRDQN LQLHRRGHNL 120 PWKLRQRTTT EVRKRVYICP EPTCVHHNPA RALGDLTGIK KHFSRKHGEK KWKCDKCSKK 180 YAVQSDWKAH QKTCGTREYK CDCGTIFSRR DSFITHRAFC DALAEENNKV NHGLMTSQTQ 240 MPLPHDQLIS SMAMNTNSSM GGGSDVLNYD ISNKNSLNKS FPDDLVPMPF KSMNMNIMAG 300 GGVGGPGMFS STSGSLFGGP RSVSSASASS LQLSSNNNNN NSSSGFNYLH HQETKNGGST 360 QSNITGAAQM SATALLQKAA QMGATASNST INSPMMQKSF VSGMAGPDQL SVNPISVNNN 420 NNNNNNIRPP SSYDDHHHQF QQQQPPDHHQ PHNSHNMVVG GFTNQLMQKG GPQEMSQLFD 480 HHTNSAASSA MTDMGLFNQV FMGIGGDPHH HHEISAANNN SSPNSIHGIR INAMERGAMG 540 PSTTLDLLGI GGSRPPNLHE HHQQQQRLDL EAMSQHRLPA IMNPFQQQRS HGDSSMEKQI 600 WDV*
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Observed in vegetative tissues. Mainly expressed in hypocotyls, petioles, shoot apices, root tips, and trichomes, and, at low levels, in leaves, stems and flowers. {ECO:0000269|PubMed:25035403}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor that acts as a positive regulator of gibberellin (GA) action, homeostasis and signaling. GA converts the GAF1 complex from transcriptional activator to repressor via the degradation of DELLA proteins. {ECO:0000269|PubMed:25035403}. |