PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.8G243500.4.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 303aa MW: 33986.1 Da PI: 4.4102

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.8G243500.4.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.4	7e-05	205	227	7	29
HHHHHHHHHHHHHHHHHHCTSCC CS HLH 7 erErrRRdriNsafeeLrellPk 29 +r RR ri ++++ LrellP Prupe.8G243500.4.p 205 VTDRTRRMRIAERLDALRELLPI 227 678*******************6 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence Send to blast
MEGQSSLTDP MQLVPLDFCG DAAIDVSQAT GDDPSQQVIM AAEGTAYQTD DLFSPWWTEK 60 PKPSLDSLNY VEFQAESSTF LPKDRSEDIL ESIPLSVSGI DDVGGVSEFQ REVLYSSLRN 120 ACGSKLTDFS MDMDEWKQVR CLRPVNDELV NAQHQLHAKY HTSRTDNLCG DKKDSVSQVD 180 PRARSALPDF HSQPHCHIST QRAAVTDRTR RMRIAERLDA LRELLPISTE DLCRSRLGGE 240 TITEPIIFRE GYGHYFCHQN MLNEPLEEMM GKLLETNPMA ASQLLENKDL LLLPMDYSEP 300 LA*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.8G243500.4.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020426382.1	0.0	uncharacterized protein LOC109950749 isoform X3
TrEMBL	A0A251N2S9	0.0	A0A251N2S9_PRUPE; Uncharacterized protein
STRING	XP_008355451.1	1e-108	(Malus domestica)
STRING	XP_008368858.1	1e-108	(Malus domestica)

Link Out ? help Back to Top
Phytozome	Prupe.8G243500.4.p