PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G225900.1.p
Common NamePRUPE_ppa001930mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 768aa    MW: 85270.4 Da    PI: 6.3793
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G225900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH120.00046006371355
                         HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         R+ i +++ eLrel+P+ a      K s  + Le++++++  Lq
  Prupe.8G225900.1.p 600 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMLFLQ 637
                         77899************77......7777779999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142151.1E-3634194IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088811.128587636IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-4600644IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    Send to blast
MGTDRLLLAT VGPPIKRRAG KKLWTLEEMG TSDLHHVLRS LCFNTEWNYA IFWKLKYRAR  60
MVLTWEDAYY DNCEQHDSSE NRCFNKTLDR LHDSHYSHDP LGLAVAKMSY HVYTLGEGIV  120
GQVAVTRKHQ WIFADNLFKN NCSPFQYCDG WQSQFSAGIR TIVVVAVPHG VVQLGSLNKV  180
IENVKLVSEI RDVFSTLQDS PVEQIRNPLQ SGINSSACLT SISPKGLASG VITDCLHNLD  240
KAANREESPD VWSSIFPHIG KDSDSSYVFP LPENCLKKAV ELANKHGGLE SSNLGCLESA  300
KLHQSKSSIL NSEHCKLVGV ELLDRTKCKG ESSGCKDTRM ASMIYSNPLS HGSVQENVNL  360
CDSADLSATF LNSAAHGRVN VDRVDFYQNE VLQVSEPSDV KFQKDLENLD FQTESGHMDT  420
SSTSMAFPAG CELHEALGPA FLNKGNYFDW EAEKNGDGIT IEMPEGMKTG QLTSDSCQEH  480
LLEAVVANVC HSGTDVKSEK SFCKSMQSLL TTEKYPEPSS HTTHTIDSEN YSIDQPSLIA  540
EDTQQCLSSS GVCGVISPKW FSSPCPSACS EQLERSSGPS KNNKKRARPG ENSRPRPRDR  600
QLIQDRIKEL RELIPNGAKC SIDSLLERTI KHMLFLQSIT KHADKLNKCA DAKEASMLGS  660
SNYERGSSWA VEVGGNLKVC SIMVENLNKN GQMVVEMMCE ECSHFLEIAE AIRSLGLTIL  720
KGVTEARSDK TWICFVVEGQ NNRSIHRMDI LWSLVQILQP KNPMQQL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.26040.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G225900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHF9687650.0HF968765.1 Malus x domestica metacontig of the Co-Gene region, cultivar Procats28, columnar allele.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020425714.10.0transcription factor bHLH155 isoform X3
TrEMBLA0A251N5130.0A0A251N513_PRUPE; Uncharacterized protein
STRINGEMJ015070.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50272022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.10.0conserved peptide upstream open reading frame 7