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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.8G182700.1.p |
Common Name | PRUPE_ppa001597mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
FAR1 |
Protein Properties |
Length: 796aa MW: 90549.3 Da PI: 6.769 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.8G182700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 101.6 | 7.7e-32 | 90 | 181 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw+v+ +++eHnHel+
Prupe.8G182700.1.p 90 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVKEHNHELV 180
9***************************************998888545677889***********************************8 PP
FAR1 91 p 91
p
Prupe.8G182700.1.p 181 P 181
6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 796 aa
Download sequence Send
to blast |
MDNEVIEFDI GLGGGGGRDG DDDFVDIEHP VDDEEMVDSP LMSSATGSAS GIVVFGGGGS 60 GEIYLPEGDL LDLEPYEGME FESEEAAKAF YNSYARRVGF STRVSSSRRS RRDGAIIQRQ 120 FVCAKEGFRN LNEKRTKDRE IKRPRTITRV GCKASLSVKM QDSGKWVVSG FVKEHNHELV 180 PPDQVHCLRS HRQISGPAKT LIDTLQAAGM GPRRIMSALI KEYGGISKVG FTEVDCRNYM 240 RNNRQRSLDG DIQMLLDYLR QMQADNQNFF YAVQGDEDQS TGNVIWADPK ARMNYSYFGD 300 TVTFDTTYRS NRYRLPFAPF TGVNHHGQPV LFGCAFLINE SEASFVWLFK TWLMAMSGRH 360 PVSITTDHDA VIQSAIMQVF PQTRHRFCKW HIFKKCQEKL SHVFLKHPTF EADFHKCVNL 420 TESIDEFESC WLSLVDRYDL RDHEWLQTVY SARRQWVPVY LRDTFFAEMS ITQRSDSMNS 480 YFDGYVNAST NLSQFFKLYE KALESRNEKE VKADFETMNT APVLKTPSPM EKQASELYTK 540 KIFMRFQEEL VGTLTFTASK GDDDGEIITY QVAKFGEDHK AYYVKLNVLE MMATCSCQMF 600 EFSGLLCRHV LAVFRVTNVL TLPSHYILKR WTRNAKSSVM LEERSSDVYT NYLESHTVRY 660 NTLRHEAFKF VDGAKSSETY DIALDALKEA AKKVAHAPKN DGKTMVNGHV RGNLAGGASR 720 IHYASGDHEG SSGQHLSEDD MDKKIRELTN ELQCANRKCE VYRANLLSVL KDIEDHKLQL 780 SIKVQNIKIG MKDGL*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |