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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.8G127700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 316aa MW: 33908.1 Da PI: 6.7127 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.1 | 1.6e-13 | 109 | 156 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h Er RR+++++ f++L llP++ +K +K++i+ +Av+YIk Lq Prupe.8G127700.1.p 109 MHIWTERERRKKMRNMFANLHALLPQL----PPKADKSTIVDEAVNYIKTLQ 156 56678*********************6....39******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.83E-16 | 104 | 173 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.005 | 105 | 155 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.48E-11 | 108 | 152 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.1E-15 | 108 | 167 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.2E-11 | 110 | 156 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.6E-9 | 113 | 161 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 2.46E-4 | 240 | 297 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence Send to blast |
MSEGETGGFS EGFLWENQSW ANLSINSDNS GGAGDEDKNF GTKEETAVMG ISTEGHNQVP 60 PAPGKKRRGG GGVGKNGIIK GSTSPADKGK GTTGARDGGG GGESDDHEMH IWTERERRKK 120 MRNMFANLHA LLPQLPPKAD KSTIVDEAVN YIKTLQQTLQ KLQKQKLERL QGATTINFDP 180 SILNPQNVAF GSREEFLANH GSAATINPSN SLLTSHCGPV NFQTWTTPNV VLNICGDEAQ 240 ISVCCPKKAG LLSAICFVLE KYKLGVMSAH VSSDCNRSMY MIQAHARGAP DQFLDTFPAD 300 EIFKQAAAEI ILMLS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.8G127700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020409135.1 | 0.0 | transcription factor bHLH95 | ||||
TrEMBL | A0A251MX70 | 0.0 | A0A251MX70_PRUPE; Uncharacterized protein | ||||
STRING | EMJ00464 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4773 | 33 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 3e-46 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.8G127700.1.p |