PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.8G095700.3.p | ||||||||
Common Name | PRUPE_ppa005829mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 418aa MW: 45837.4 Da PI: 6.2646 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.8 | 5.4e-10 | 250 | 297 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Prupe.8G095700.3.p 250 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 297 8**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.57E-15 | 244 | 305 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.61E-10 | 244 | 301 | No hit | No description |
PROSITE profile | PS50888 | 15.618 | 246 | 296 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.8E-16 | 246 | 302 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.2E-7 | 250 | 297 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 7.6E-10 | 252 | 302 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0009637 | Biological Process | response to blue light | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence Send to blast |
MNRALPEMLN CMNAPGTFLA GNCTDMTVLE RQRARMKWHL HEHNDPIQLH QQQQGYNFSG 60 NELSGVFSVP IPAGQAQGFM GLVCGDSAVK PDPCSENRWA ELGYGSCGLV VNNNGAAGFE 120 EMINGRNNNS NISRTFSCPP TVAAEKKSND AVLSQKISLP TGKESFKKRK ADKVQSNKAV 180 AAEDDSTEKR MKGCAEEGDS KITEQTSTKN NTNNDRESSG DTSKDNSKAS EVQKPDYIHV 240 RARRGQATDS HSLAERVRRE KISERMKYLQ DLVPGCNKIT GKAGMLDEII NYVQSLQRQV 300 EMFPACAANF PTIGMSSEMT NSAYVQFNPV QQMVSSCGLD MGINSSDLAL RRTISAPVSI 360 PETFLDTSCF TQAPPTAIWD ADLQNLFNVE FQQGRTTPFQ SQPFTGSIEA SNLKMEM* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.8G095700.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007199864.1 | 0.0 | transcription factor bHLH63 isoform X1 | ||||
TrEMBL | A0A251MVN2 | 0.0 | A0A251MVN2_PRUPE; Uncharacterized protein | ||||
STRING | EMJ01063 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 7e-51 | cryptochrome-interacting basic-helix-loop-helix 1 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.8G095700.3.p |
Entrez Gene | 18766580 |