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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.8G095200.1.p | ||||||||
Common Name | PRUPE_ppa019438mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 287aa MW: 33138 Da PI: 5.6494 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.9 | 1.4e-17 | 8 | 141 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiy..kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyW 83 p GfrFhPtd+e+v +L+ + ++k + +++i+ +d++ k+eP+++ +k+ + ++++yf s +k + kr r + + g+W Prupe.8G095200.1.p 8 PLGFRFHPTDQEIVGSFLHTLLVQRKplmPPYSNFIRACDLFgkKLEPSEIWNKYGGpqlVDQDLYFLSGLNKLT--TKRMDRsIGHGGTW 96 89******************988877787666778*****974478*****754433332556778888877654..468888567799** PP NAM 84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++t + k + + + + +g k+ + + + + + e+t W+++ey+l Prupe.8G095200.1.p 97 SETESFKLIEDDngNPNPIGRKRKFRYEN--KGSEEHTWWLLDEYSL 141 *********998444455********984..334469********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.22E-20 | 3 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.747 | 7 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.9E-12 | 8 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence Send to blast |
MAHHHNVPLG FRFHPTDQEI VGSFLHTLLV QRKPLMPPYS NFIRACDLFG KKLEPSEIWN 60 KYGGPQLVDQ DLYFLSGLNK LTTKRMDRSI GHGGTWSETE SFKLIEDDNG NPNPIGRKRK 120 FRYENKGSEE HTWWLLDEYS LFVGPKNDYN DRSYDFDFVI CRMRKNDRAS SKEINLIRSS 180 RDQVQKKRST NKKMKKDDQM GSTEESSSHV QQGYSPSITG GELVVSYDNV DPIDQTFFED 240 NPIFNIEQIL CETKVEDACS PSNSENVDNS YSKWTESYME ELMACI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.8G095200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007199132.1 | 0.0 | NAC transcription factor 56 | ||||
TrEMBL | M5VHT2 | 0.0 | M5VHT2_PRUPE; Uncharacterized protein | ||||
STRING | EMJ00331 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF19036 | 2 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 6e-09 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.8G095200.1.p |
Entrez Gene | 18768139 |