PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 158aa MW: 17589.6 Da PI: 6.2639

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.8G091600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.3	6.7e-13	30	75	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ +r+++NRe+ArrsR RK++ ++ L ++eL++eN + + ++ Prupe.8G091600.1.p 30 RKRKRMISNRESARRSRMRKQKHLDDLMAQMAELKKENNQIITSVN 75 6789**********************************99886665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.5E-10	22	74	No hit	No description
SMART	SM00338	2.1E-17	26	90	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.461	28	91	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.2E-10	30	75	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.21E-12	30	83	No hit	No description
CDD	cd14702	3.61E-18	31	82	No hit	No description
PROSITE pattern	PS00036	0	33	48	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009845	Biological Process	seed germination
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence Send to blast
MASSSGTSSG SSMLQNSGSE EDLQVLMDQR KRKRMISNRE SARRSRMRKQ KHLDDLMAQM 60 AELKKENNQI ITSVNITSQH YMNIEAENSV LRAQADELSN RLQSLNEIAS FLNASNGVFA 120 AGDSSSFNEP TDSFFNPLNL SYLNQPIMAS AAEMFHY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	50	RKRKRMISNRESARRSRMRKQK
2	42	49	RRSRMRKQ

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Ppe.19208	0.0	fruit

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Expressed in the micropylar endosperm and radicle tip in early germinating seeds. {ECO:0000269\|PubMed:23461773}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269\|PubMed:23461773}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00239	DAP	Transfer from AT1G75390	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.8G091600.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	JN021399	0.0	JN021399.1 Prunus persica bZIP transcription factor mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007200420.1	1e-111	bZIP transcription factor 11
Refseq	XP_021827966.1	1e-111	bZIP transcription factor 11-like
Swissprot	C0Z2L5	3e-50	BZP44_ARATH; bZIP transcription factor 44
TrEMBL	I6MK31	1e-109	I6MK31_PRUPE; BZIP transcription factor
STRING	EMJ01619	1e-110	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34590.1	8e-49	G-box binding factor 6

Link Out ? help Back to Top
Phytozome	Prupe.8G091600.1.p
Entrez Gene	18767767

Publications ? help Back to Top
Lovisetto A, et al. Characterization of a bZIP gene highly expressed during ripening of the peach fruit. Plant Physiol. Biochem., 2013. 70: p. 462-70 [PMID:23845825] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Pedrotti L, et al. Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]