PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G085000.1.p
Common NamePRUPE_ppa011488mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family DBB
Protein Properties Length: 209aa    MW: 22875.9 Da    PI: 6.012
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G085000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box216.8e-07433534
            zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                         C+ +e   ++ fC  ++  lC++C ++ H
  Prupe.8G085000.1.p  4 LCDVCEGAAAIVFCAADEAALCRSCDEKVH 33
                        7******99******************998 PP
2zf-B_box27.56.6e-095292238
            zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                        + ++C+ +e+ ++ ++Ce +++ lC +C +  H g    H+
  Prupe.8G085000.1.p 52 DVPCCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtHR 92
                        5789**************************99966666776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.94147IPR000315B-box-type zinc finger
SMARTSM003369.9E-8147IPR000315B-box-type zinc finger
CDDcd000212.46E-5333No hitNo description
PfamPF006431.4E-5334IPR000315B-box-type zinc finger
PROSITE profilePS501199.035196IPR000315B-box-type zinc finger
SMARTSM003365.7E-105196IPR000315B-box-type zinc finger
PfamPF006436.6E-75292IPR000315B-box-type zinc finger
CDDcd000213.83E-75693No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010100Biological Processnegative regulation of photomorphogenesis
GO:0070370Biological Processcellular heat acclimation
GO:0071483Biological Processcellular response to blue light
GO:0005634Cellular Componentnucleus
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MRTLCDVCEG AAAIVFCAAD EAALCRSCDE KVHMCNKLAS RHIRVGLASP SDVPCCDICE  60
NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HRRYLLFRQR VEFPGDKPGR SEELGLQPLD  120
QKEVRKDHIQ PPSLSIRENQ QNCSASPVAV LDNNIVGDYK MDNRLIDLNT RPQRMNGQAS  180
TSPEQGLDVQ NGVNDESASV VPVGSVKR*
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G085000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007201842.11e-153B-box zinc finger protein 18 isoform X1
SwissprotC0SVM54e-79BBX19_ARATH; B-box zinc finger protein 19
TrEMBLM5VQ211e-151M5VQ21_PRUPE; Uncharacterized protein
STRINGEMJ030411e-152(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27343370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.12e-81DBB family protein