PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G071300.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 367aa    MW: 40218.7 Da    PI: 4.6744
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G071300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.62.3e-15199235135
                GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                         C++Cg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  Prupe.8G071300.1.p 199 CQHCGISEksTPAMRRGPAGPRSLCNACGLMWANKGT 235
                         *****99999************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009799.2E-86297IPR010399Tify domain
PROSITE profilePS5132012.8776297IPR010399Tify domain
PfamPF062005.9E-106596IPR010399Tify domain
PfamPF062032.0E-14130171IPR010402CCT domain
PROSITE profilePS5101712.789130172IPR010402CCT domain
SMARTSM004011.8E-12193246IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.5E-14197240IPR013088Zinc finger, NHR/GATA-type
SuperFamilySSF577161.43E-11197249No hitNo description
CDDcd002024.74E-14198241No hitNo description
PROSITE patternPS003440199226IPR000679Zinc finger, GATA-type
PfamPF003202.2E-13199235IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MEMVNAQLLQ ARAYEGEDQL VHVPAELEGD SDEGGGAKAA MNGGDQTRRS SGVTMSRCNS  60
ALPSRTSELT IAFEGEVHVF PAVTPDKVQA VLLLLGGRDI SSSFPSSESL LESNSGGIGD  120
ISRNSKLSRR TASLVRFREK RKERCFEKKI RYTCRKEVAQ RMYRKNGQFA SLKDDSKIAS  180
GNCDSSDGTS CPESVLRRCQ HCGISEKSTP AMRRGPAGPR SLCNACGLMW ANKGTLRDLT  240
KAGRPIHFDQ TELETAADFK PLMLKPENAH LDPDEEGSPE ESKPIALDTE NPPLRLGDED  300
MLETAEAATT NHISIQMENS TVNFDEQENL DEFCNASGTE FEIPANFDEQ VVDFYDCNIE  360
THWPGT*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G071300.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020425765.10.0GATA transcription factor 19 isoform X1
SwissprotQ5Z4U54e-58GAT20_ORYSJ; GATA transcription factor 20
TrEMBLA0A251MUF00.0A0A251MUF0_PRUPE; Uncharacterized protein
STRINGXP_008237241.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33193364
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.28e-48ZIM-like 1