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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.8G035400.1.p | ||||||||
Common Name | PRUPE_ppa007941mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 352aa MW: 39402.1 Da PI: 4.8764 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155.6 | 2.1e-48 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 l+pGfrF+Ptd elv++yLk+k+ gk+l + +vi+evdiyk++PwdLp k + ++++ + yfF++r+kky++g+r +rat+ gyWk+tgkd Prupe.8G035400.1.p 6 LAPGFRFKPTDVELVQYYLKRKLLGKRLGF-KVIAEVDIYKYDPWDLPdKsCWESGDLKRYFFCPREKKYRNGNRIQRATEGGYWKTTGKD 95 579************************999.99**************9644667778899******************************* PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++vl +ge+vg ktL+f++grap+g +t+Wvmheyrle Prupe.8G035400.1.p 96 RSVLY-SGEVVGWIKTLIFHTGRAPRGDRTNWVMHEYRLE 134 *****.999*****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.97E-57 | 3 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.499 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.6E-24 | 8 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MGKSSLAPGF RFKPTDVELV QYYLKRKLLG KRLGFKVIAE VDIYKYDPWD LPDKSCWESG 60 DLKRYFFCPR EKKYRNGNRI QRATEGGYWK TTGKDRSVLY SGEVVGWIKT LIFHTGRAPR 120 GDRTNWVMHE YRLEDQGLAD RGVPLDSYVI CMIFQKDGLG PKIGAQYGAP FKEEDWTDDE 180 VEICSEAIPH ENMSEPNLVV PSNCNSSITT SGHTPKGIHT SPSESCISDV LPPSCNVHQL 240 VSSNHVTMEK LHGSDDDILS MLNCFTEGST SLMKENDKNE ELGNVIPSGN ASATPNFNSD 300 DIYEGLGDLG KMARVSEDGY NFSNVHNSIF APAQMQLGDN EQFLELDDLS W* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-45 | 5 | 156 | 14 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.2571 | 0.0 | fruit |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00583 | DAP | Transfer from AT5G64060 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.8G035400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016650765.1 | 0.0 | PREDICTED: NAC domain-containing protein 82-like | ||||
TrEMBL | M5VNW3 | 0.0 | M5VNW3_PRUPE; Uncharacterized protein | ||||
STRING | EMJ02591 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3302 | 34 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 4e-89 | NAC domain containing protein 103 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.8G035400.1.p |
Entrez Gene | 18768042 |