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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.8G035300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 352aa MW: 39171.9 Da PI: 5.1297 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.1 | 1.5e-48 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppGfrF+Ptd elv +yLk+kv gk+l+ ++i+evdi+k+ PwdLp k ++++ +wyfF+++++ky+tg r +r t+ gyWk+tgkd Prupe.8G035300.1.p 6 LPPGFRFSPTDVELVRYYLKRKVMGKRLHS-NFIAEVDIHKYAPWDLPeKsGWQSGDLKWYFFCPTARKYPTGVRVQRGTECGYWKSTGKD 95 79*************************999.89**************94345566778********************************* PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++vl +ge+ g kk+L+f+kgr+pkge+tdWvmheyrle Prupe.8G035300.1.p 96 RSVLY-NGEVSGWKKILIFHKGRSPKGERTDWVMHEYRLE 134 *****.999*****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.11E-57 | 3 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.273 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.2E-25 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MGKPPLPPGF RFSPTDVELV RYYLKRKVMG KRLHSNFIAE VDIHKYAPWD LPEKSGWQSG 60 DLKWYFFCPT ARKYPTGVRV QRGTECGYWK STGKDRSVLY NGEVSGWKKI LIFHKGRSPK 120 GERTDWVMHE YRLEAKDLAD SGVPHDSYVI CMIFHKDGWG PKNGAQYGAP FKEEDWTDDE 180 AEICSEAVPH ENMPEPNLVV QSNCNSSVTT SGHSPKDIHL GPSESCISDV LPPSCNALQL 240 VSSNHVTMEK LRGSGDDILP MLNCFTEGST SLMKVNDKNE ELGNVIHSGN ASATPNVNGD 300 DIYEDLGDLG KMAGVSEDGF YFSNVHNSIC APAQMQLGDN DQFLELDDLS W* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-43 | 6 | 156 | 15 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in the epidermal cells of the root apical region. {ECO:0000269|PubMed:20388856}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes. {ECO:0000250|UniProtKB:Q9C8W9}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.8G035300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020426054.1 | 0.0 | NAC domain-containing protein 82 | ||||
Swissprot | Q9FY82 | 3e-90 | NAC82_ARATH; NAC domain-containing protein 82 | ||||
TrEMBL | A0A251MSC8 | 0.0 | A0A251MSC8_PRUPE; Uncharacterized protein | ||||
STRING | EMJ05887 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3302 | 34 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09330.4 | 1e-92 | NAC domain containing protein 82 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.8G035300.1.p |
Publications ? help Back to Top | |||
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