PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.8G028800.2.p

Common Name

PRUPE_ppa021097mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

Trihelix

Protein Properties

Length: 489aa MW: 55967.8 Da PI: 7.963

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.8G028800.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.2	7.5e-12	1	48	38	87
trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 m e+g+ rs+k+Ckek+en+ k+++++keg++++ ++ +t+++fd+lea Prupe.8G028800.2.p 1 MCEHGYYRSAKKCKEKFENVYKYHRRTKEGRSGK--QEGKTYRFFDELEA 48 679***************************96..55557****985 PP
2	trihelix	101.1	9.2e-32	311	395	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev aLi++r+ ++ r++++ k+ lWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++k r +e+s+tcpyf+qle Prupe.8G028800.2.p 311 RWPRVEVEALINLRTCLDVRYQEAGPKGSLWEEISAGMRRLGYNRSAKRCKEKWENINKYFKKVKESSKTR-PEDSKTCPYFNQLE 395 8******************************************************************97.99*********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	1.9E-7	1	48	No hit	No description
SMART	SM00717	0.0075	308	370	IPR001005	SANT/Myb domain
Pfam	PF13837	2.1E-21	310	396	No hit	No description
CDD	cd12203	6.50E-27	311	375	No hit	No description
PROSITE profile	PS50090	6.957	311	368	IPR017877	Myb-like domain

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence Send to blast
MCEHGYYRSA KKCKEKFENV YKYHRRTKEG RSGKQEGKTY RFFDELEAFD QQNNHPSVPP 60 KPQVLLWPNN HHHPNNPTVV SHVITSVVPL SSTPNMMATT NGSHLNGSHI SPPPINSLPP 120 QVTKPVNLYH QNLNGFKPSL ATSNLFSSST SSTASDEEFQ VQQSGKKKRK WKYFFRRLTK 180 EVLEKQEKLQ EKFLEAIAKS EHQRTVREEA WRMQEMARLD KEHQILAQER SSAAAKDAAV 240 IEFLQKVSGQ QNVTNNIQAI EVNRTIPSRP QPLPVLMPPP PPAPVAVITT SFEVPRLDKG 300 DNSTIPPGST RWPRVEVEAL INLRTCLDVR YQEAGPKGSL WEEISAGMRR LGYNRSAKRC 360 KEKWENINKY FKKVKESSKT RPEDSKTCPY FNQLEDLYRK KNMNNSSHVG YVEKPLPQAI 420 LQPLIKVQPD QPVFEAIERE NGDKNEEDED GESTEEEDHL DRSNDDDQDE QMGIVTNYKE 480 SSMEMVES*

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence Send to blast

MCEHGYYRSA KKCKEKFENV YKYHRRTKEG RSGKQEGKTY RFFDELEAFD QQNNHPSVPP  60
KPQVLLWPNN HHHPNNPTVV SHVITSVVPL SSTPNMMATT NGSHLNGSHI SPPPINSLPP  120
QVTKPVNLYH QNLNGFKPSL ATSNLFSSST SSTASDEEFQ VQQSGKKKRK WKYFFRRLTK  180
EVLEKQEKLQ EKFLEAIAKS EHQRTVREEA WRMQEMARLD KEHQILAQER SSAAAKDAAV  240
IEFLQKVSGQ QNVTNNIQAI EVNRTIPSRP QPLPVLMPPP PPAPVAVITT SFEVPRLDKG  300
DNSTIPPGST RWPRVEVEAL INLRTCLDVR YQEAGPKGSL WEEISAGMRR LGYNRSAKRC  360
KEKWENINKY FKKVKESSKT RPEDSKTCPY FNQLEDLYRK KNMNNSSHVG YVEKPLPQAI  420
LQPLIKVQPD QPVFEAIERE NGDKNEEDED GESTEEEDHL DRSNDDDQDE QMGIVTNYKE  480
SSMEMVES*

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00244	DAP	Transfer from AT1G76890	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.8G028800.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007200087.1	0.0	trihelix transcription factor GT-2
TrEMBL	A0A251MRZ5	0.0	A0A251MRZ5_PRUPE; Uncharacterized protein
STRING	EMJ01286	0.0	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	1e-91	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Prupe.8G028800.2.p
Entrez Gene	18767703