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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.7G228600.1.p |
| Common Name | PRUPE_ppa008116mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
Trihelix |
| Protein Properties |
Length: 362aa MW: 42571.6 Da PI: 4.5893 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.7G228600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 46.2 | 1.2e-14 | 122 | 206 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
Wt++ v +L+e+ ++ +l+r++l+ +W+ev++k+ ++ ++er+ +qC++ ++ l+++ykk+ke ++ +ss+++yf++++
Prupe.7G228600.1.p 122 WTEHAVFVLLEVWGDRFLQLGRKSLRSEDWREVAEKVsEASKIERTDTQCRSMLDMLKRKYKKEKEKVEEM-GLNSSKWAYFKKMD 206
*************************************777899***********************99996.89999********8 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| Pfam | PF13837 | 9.8E-20 | 120 | 208 | No hit | No description |
| Sequence ? help Back to Top |
| Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MDDMDDDTRY HSKAYSLNHH NSSGRRKINI RNTQYSRPIA NRYAEEDDDE LDEFDEGNGR 60
QDHDEEEEEE HPRGLHRNFD ADDGFERHTK KRKVKNLESN YEFAPRVRVP YRDPSSRGEE 120
DWTEHAVFVL LEVWGDRFLQ LGRKSLRSED WREVAEKVSE ASKIERTDTQ CRSMLDMLKR 180
KYKKEKEKVE EMGLNSSKWA YFKKMDMLMA SSLRQECGLA CGVDSGEYVF MNTRVYLERS 240
NGFDEMRDSP GESETDEDED GNDDQDAFPP RMGMRGVDRG EEGSSYRVLA DSIHKFGEIY 300
EKIESSKRQQ MRELEKMRKD FHKELEFQKK QILERAQVEI AKIQEADDDD ETDVSAEDLS 360
E*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 178 | 186 | KRKYKKEKE |
